Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Gm16061-201ENSMUST00000122167 857 ntBASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34bJ3QNR8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Gm23634-201ENSMUST00000175071 91 ntBASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34bJ3QNR8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Trim34bJ3QNR8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Gm37025-201ENSMUST00000195159 829 ntBASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Gm18101-201ENSMUST00000215769 548 ntBASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34bJ3QNR8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Gm22697-201ENSMUST00000175194 63 ntBASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34bJ3QNR8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Gm9731-201ENSMUST00000209480 747 ntBASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim34bJ3QNR8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Gm13474-201ENSMUST00000122466 815 ntBASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim34bJ3QNR8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms