Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm21788J3QNH3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Gm13148-201ENSMUST00000118892 745 ntBASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm21788J3QNH3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm21788J3QNH3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm21788J3QNH3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Gm12933-201ENSMUST00000120203 872 ntBASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm21788J3QNH3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm21788J3QNH3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms