Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Gm11643-201ENSMUST00000119578 864 ntBASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-3J3QMG8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Gm18666-201ENSMUST00000190039 958 ntBASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-3J3QMG8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13d-3J3QMG8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav13d-3J3QMG8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gm10653-202ENSMUST00000139570 835 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gm42545-201ENSMUST00000202755 922 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gm18025-201ENSMUST00000221733 862 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-3J3QMG8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-3J3QMG8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Gm5643-201ENSMUST00000117081 966 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms