Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm8879F6R3J9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm8879F6R3J9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm8879F6R3J9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm8879F6R3J9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.83■□□□□ 0.29
Gm8879F6R3J9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm8879F6R3J9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm8879F6R3J9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm8879F6R3J9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm8879F6R3J9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Gm7514-201ENSMUST00000209475 934 ntBASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm8879F6R3J9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm8879F6R3J9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm8879F6R3J9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm8879F6R3J9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm8879F6R3J9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms