Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc38A3KMP2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc38A3KMP2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc38A3KMP2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.13■□□□□ 0.65
Ttc38A3KMP2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc38A3KMP2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Gm18666-201ENSMUST00000190039 958 ntBASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc38A3KMP2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc38A3KMP2 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.1■□□□□ 0.65
Ttc38A3KMP2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc38A3KMP2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc38A3KMP2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc38A3KMP2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc38A3KMP2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms