Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Gm10418-201ENSMUST00000100943 576 ntBASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Gm29791-202ENSMUST00000207888 369 ntBASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-1A0N8R1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Mir8112-201ENSMUST00000184382 131 ntBASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 AV356131-201ENSMUST00000206201 750 ntBASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-1A0N8R1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Gm6365-201ENSMUST00000054711 744 ntBASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-1A0N8R1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Gm2399-201ENSMUST00000104944 225 ntBASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-1A0N8R1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Gm7290-201ENSMUST00000104990 617 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms