Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-1A0N8R0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Mir8112-201ENSMUST00000184382 131 ntBASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-1A0N8R0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Gm29791-202ENSMUST00000207888 369 ntBASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-1A0N8R0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms