Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm12527-201ENSMUST00000117967 564 ntBASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lnp1A0A1B0GSK3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.63□□□□□ -0.07
Lnp1A0A1B0GSK3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Mir2861-201ENSMUST00000175539 82 ntBASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lnp1A0A1B0GSK3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lnp1A0A1B0GSK3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms