Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Rarb-207ENSMUST00000225921 2756 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm18671-201ENSMUST00000214826 683 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-5A0A140T8M6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm45141-201ENSMUST00000206502 1888 ntBASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm13146-201ENSMUST00000118508 780 ntBASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-5A0A140T8M6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Igkv3-5A0A140T8M6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-5A0A140T8M6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms