Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Gm35339A0A140LHH9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Gm35339A0A140LHH9 Gm9449-201ENSMUST00000207265 1011 ntBASIC37.02■■■■□ 3.52
Gm35339A0A140LHH9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Gm35339A0A140LHH9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC37.01■■■■□ 3.52
Gm35339A0A140LHH9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Gm35339A0A140LHH9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Gm35339A0A140LHH9 Gm2651-201ENSMUST00000203560 838 ntBASIC37.01■■■■□ 3.52
Gm35339A0A140LHH9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC37.01■■■■□ 3.52
Gm35339A0A140LHH9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.51
Gm35339A0A140LHH9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44357-201ENSMUST00000195897 142 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm19658-201ENSMUST00000196231 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44367-201ENSMUST00000196836 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44350-201ENSMUST00000197197 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44390-201ENSMUST00000197533 144 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44313-201ENSMUST00000198018 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44486-201ENSMUST00000198508 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44454-201ENSMUST00000198541 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44314-201ENSMUST00000199263 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44394-201ENSMUST00000199558 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44484-201ENSMUST00000199873 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44466-201ENSMUST00000200264 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm44359-201ENSMUST00000200671 138 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Gm18206-201ENSMUST00000207027 926 ntBASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Gm35339A0A140LHH9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm35339A0A140LHH9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Gm35339A0A140LHH9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC36.97■■■■□ 3.51
Gm35339A0A140LHH9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC36.97■■■■□ 3.51
Gm35339A0A140LHH9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Gm35339A0A140LHH9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Gm35339A0A140LHH9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Gm35339A0A140LHH9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Gm35339A0A140LHH9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC36.95■■■■□ 3.51
Gm35339A0A140LHH9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Gm35339A0A140LHH9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Gm35339A0A140LHH9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Gm19721-201ENSMUST00000195284 1764 ntBASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm35339A0A140LHH9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Gm35339A0A140LHH9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC36.92■■■■□ 3.5
Gm35339A0A140LHH9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC36.92■■■■□ 3.5
Gm35339A0A140LHH9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Gm35339A0A140LHH9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
Gm35339A0A140LHH9 Gm37374-201ENSMUST00000194954 1829 ntBASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Gm35339A0A140LHH9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms