Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm42778-201ENSMUST00000199644 553 ntBASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Nespas-201ENSMUST00000143738 1083 ntBASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms