Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-1A0A0G2JEV5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-1A0A0G2JEV5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-1A0A0G2JEV5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.52□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-1A0A0G2JEV5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms