Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm10698-201ENSMUST00000182663 604 ntBASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Zfp783-201ENSMUST00000095946 670 ntBASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-1A0A0G2JEU8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mir6982-201ENSMUST00000184354 68 ntBASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms