Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Grk6-206ENSMUST00000224995 2971 ntBASIC18■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.96■□□□□ 0.47
Igkv5-43A0A0B4J1J2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Igkv5-43A0A0B4J1J2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms