Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Golgb1-201ENSMUST00000023534 498 ntBASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv5A0A0B4J1G9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm27801-201ENSMUST00000184174 223 ntBASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv5A0A0B4J1G9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv5A0A0B4J1G9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv5A0A0B4J1G9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms