Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-4A0A075B6B4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Mir2861-201ENSMUST00000175539 82 ntBASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-4A0A075B6B4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Gm5643-201ENSMUST00000117081 966 ntBASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Gm8520-201ENSMUST00000186517 868 ntBASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Gm29791-202ENSMUST00000207888 369 ntBASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-4A0A075B6B4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Gm13168-201ENSMUST00000121771 632 ntBASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-4A0A075B6B4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-4A0A075B6B4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-4A0A075B6B4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-4A0A075B6B4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-4A0A075B6B4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms