Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-7A0A075B6B0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm20760-201ENSMUST00000179197 648 ntBASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-7A0A075B6B0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-7A0A075B6B0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-7A0A075B6B0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-7A0A075B6B0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms