Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-2A0A075B649 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Tgds-204ENSMUST00000228543 1594 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm12821-201ENSMUST00000120022 600 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm43017-201ENSMUST00000198296 752 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm9988-201ENSMUST00000069786 435 ntBASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-2A0A075B649 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav13-2A0A075B649 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Gm27454-201ENSMUST00000185090 204 ntBASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-2A0A075B649 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms