Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7-6A0A075B640 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7-6A0A075B640 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7-6A0A075B640 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7-6A0A075B640 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7-6A0A075B640 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav7-6A0A075B640 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7-6A0A075B640 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms