Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm43338-201ENSMUST00000198617 2223 ntBASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm43294-201ENSMUST00000202850 2490 ntBASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm42778-201ENSMUST00000199644 553 ntBASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms