Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv4A0A075B5I2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv4A0A075B5I2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv4A0A075B5I2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv4A0A075B5I2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv4A0A075B5I2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Gm6576-201ENSMUST00000169678 883 ntBASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv4A0A075B5I2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms