Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ClpbQ60649 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ClpbQ60649 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ClpbQ60649 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.91□□□□□ -1.62
ClpbQ60649 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ClpbQ60649 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
ClpbQ60649 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ClpbQ60649 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ClpbQ60649 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
ClpbQ60649 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.9□□□□□ -1.62
ClpbQ60649 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ClpbQ60649 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm22725-201ENSMUST00000158092 110 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm8604-201ENSMUST00000183150 965 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.9□□□□□ -1.63
ClpbQ60649 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm37659-201ENSMUST00000194574 111 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm8874-201ENSMUST00000196826 286 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm44820-201ENSMUST00000207420 396 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm5750-201ENSMUST00000218711 801 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ClpbQ60649 Mir20a-201ENSMUST00000083508 107 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Gm7676-201ENSMUST00000084055 319 ntBASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.9□□□□□ -1.63
ClpbQ60649 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ClpbQ60649 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
ClpbQ60649 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
ClpbQ60649 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm14086-201ENSMUST00000117152 173 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm15981-201ENSMUST00000119196 457 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm25389-201ENSMUST00000157340 286 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Mir3062-201ENSMUST00000174986 105 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm28503-201ENSMUST00000185966 147 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm28061-201ENSMUST00000189085 807 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm5285-201ENSMUST00000193089 666 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm37030-201ENSMUST00000194254 295 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.89□□□□□ -1.63
ClpbQ60649 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm44776-201ENSMUST00000207212 381 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ClpbQ60649 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm23514-201ENSMUST00000082827 130 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.89□□□□□ -1.63
ClpbQ60649 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ClpbQ60649 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
ClpbQ60649 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.89□□□□□ -1.63
ClpbQ60649 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ClpbQ60649 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms