Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm24469-201ENSMUST00000104487 131 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm12328-201ENSMUST00000118611 197 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm3362-201ENSMUST00000148102 466 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm23855-201ENSMUST00000158377 135 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm28830-201ENSMUST00000188192 213 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm29097-201ENSMUST00000190273 422 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm8458-201ENSMUST00000196658 819 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm8264-201ENSMUST00000217801 465 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm8158-201ENSMUST00000219220 465 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm8112-201ENSMUST00000219637 465 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trafd1Q3UDK1 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm12237-201ENSMUST00000120158 470 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm11910-201ENSMUST00000121624 432 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm25103-201ENSMUST00000122671 318 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm24628-201ENSMUST00000122761 289 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm15905-201ENSMUST00000137042 298 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm22588-201ENSMUST00000157510 140 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Mir1947-201ENSMUST00000158235 85 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm22764-201ENSMUST00000158370 92 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm25447-201ENSMUST00000158997 128 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm43144-201ENSMUST00000198256 485 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm43596-201ENSMUST00000202818 884 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm43894-201ENSMUST00000203274 688 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm4714-201ENSMUST00000203395 279 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm44431-201ENSMUST00000203500 413 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm7128-201ENSMUST00000211639 533 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Mir27a-201ENSMUST00000083510 87 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Mir215-201ENSMUST00000083628 112 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Trafd1Q3UDK1 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.55□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms