Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm32526-201ENSMUST00000221878 981 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm22810-201ENSMUST00000082741 158 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm15175-201ENSMUST00000117629 132 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm14082-201ENSMUST00000118582 801 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm15113-201ENSMUST00000119280 836 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm14563-201ENSMUST00000120571 354 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm12900-201ENSMUST00000120919 573 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm12451-201ENSMUST00000121636 633 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm15164-201ENSMUST00000122203 271 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm22519-201ENSMUST00000158270 178 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm23568-201ENSMUST00000177960 92 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm24829-201ENSMUST00000179245 92 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm17048-201ENSMUST00000179266 847 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm28843-201ENSMUST00000189198 678 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm29546-201ENSMUST00000191171 678 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm38030-201ENSMUST00000192376 475 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm42708-201ENSMUST00000196332 905 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm42924-201ENSMUST00000197261 185 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm29848-201ENSMUST00000203107 295 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm45366-201ENSMUST00000209828 384 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms