Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm12849-201ENSMUST00000120013 739 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm15390-201ENSMUST00000120323 738 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm12317-201ENSMUST00000122307 319 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm26310-201ENSMUST00000157766 117 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm25907-201ENSMUST00000158486 125 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm3531-201ENSMUST00000162698 489 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm9320-201ENSMUST00000184151 473 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm18426-201ENSMUST00000191874 973 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm17937-201ENSMUST00000197908 742 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm19617-201ENSMUST00000202977 308 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm8999-201ENSMUST00000204951 969 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm44817-201ENSMUST00000205416 453 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm18377-201ENSMUST00000215141 607 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc3Q64519 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc3Q64519 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc3Q64519 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.7□□□□□ -1.66
Sdc3Q64519 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.7□□□□□ -1.66
Sdc3Q64519 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc3Q64519 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm14560-201ENSMUST00000118672 375 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm12820-201ENSMUST00000119233 342 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm16179-201ENSMUST00000120685 373 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm22084-201ENSMUST00000157585 105 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm23513-201ENSMUST00000158181 133 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm24217-201ENSMUST00000158260 133 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm17081-201ENSMUST00000167363 478 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm4134-201ENSMUST00000173244 563 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm25534-201ENSMUST00000175365 125 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 V1rg10-201ENSMUST00000183378 937 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm20056-201ENSMUST00000194813 519 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm42720-201ENSMUST00000196813 300 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm42990-201ENSMUST00000199231 312 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm18660-201ENSMUST00000199542 629 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm31532-201ENSMUST00000203555 767 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm44972-201ENSMUST00000206419 406 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc3Q64519 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Gm18387-201ENSMUST00000220333 702 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sdc3Q64519 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc3Q64519 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.69□□□□□ -1.66
Sdc3Q64519 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sdc3Q64519 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms