Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm15779-201ENSMUST00000117470 412 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm11910-201ENSMUST00000121624 432 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Gm15796-201ENSMUST00000162135 204 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm23799-201ENSMUST00000175559 120 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Six4Q61321 Gm21850-201ENSMUST00000179792 359 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm18791-201ENSMUST00000204611 726 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Gm20586-201ENSMUST00000210122 547 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Six4Q61321 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.59□□□□□ -1.67
Six4Q61321 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.59□□□□□ -1.67
Six4Q61321 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Six4Q61321 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Six4Q61321 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
Six4Q61321 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Gm14878-201ENSMUST00000118167 293 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 Gm5258-201ENSMUST00000165437 327 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Mir6410-201ENSMUST00000184204 104 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm27387-201ENSMUST00000184583 116 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm28871-201ENSMUST00000186191 687 ntBASIC4.58□□□□□ -1.68
Six4Q61321 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 Gm29148-201ENSMUST00000188140 336 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm38046-201ENSMUST00000192733 550 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm36998-201ENSMUST00000193205 704 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm37095-201ENSMUST00000195421 205 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Six4Q61321 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Gm44604-201ENSMUST00000205475 496 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Gm17779-201ENSMUST00000213395 394 ntBASIC4.58□□□□□ -1.68
Six4Q61321 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.58□□□□□ -1.68
Six4Q61321 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.58□□□□□ -1.68
Six4Q61321 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Six4Q61321 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Neat1-201ENSMUST00000173672 20771 ntBASIC4.58□□□□□ -1.68
Six4Q61321 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Six4Q61321 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Six4Q61321 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Gm22473-201ENSMUST00000104114 132 ntBASIC4.57□□□□□ -1.68
Six4Q61321 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Gm14388-201ENSMUST00000118119 477 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm11781-201ENSMUST00000118328 472 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm11584-201ENSMUST00000120636 325 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.57□□□□□ -1.68
Six4Q61321 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm22243-201ENSMUST00000178754 120 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm27568-201ENSMUST00000184220 99 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Gm8599-201ENSMUST00000193033 457 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Gm44523-201ENSMUST00000205616 417 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm17766-201ENSMUST00000209223 442 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm45499-201ENSMUST00000211656 280 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.57□□□□□ -1.68
Six4Q61321 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.57□□□□□ -1.68
Six4Q61321 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.57□□□□□ -1.68
Six4Q61321 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Six4Q61321 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Six4Q61321 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Six4Q61321 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Six4Q61321 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.57□□□□□ -1.68
Six4Q61321 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.56□□□□□ -1.68
Six4Q61321 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.56□□□□□ -1.68
Six4Q61321 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Six4Q61321 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Six4Q61321 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Six4Q61321 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms