Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm24608-201ENSMUST00000104381 136 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm4914-201ENSMUST00000119757 459 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm8200-201ENSMUST00000122390 222 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm22718-201ENSMUST00000122701 315 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm44779-201ENSMUST00000206937 708 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm7034-201ENSMUST00000218638 645 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.61□□□□□ -1.51
Shank3Q4ACU6 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm14603-201ENSMUST00000121275 448 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm3160-201ENSMUST00000128343 607 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm4487-201ENSMUST00000150617 442 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm24636-201ENSMUST00000158673 288 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm29045-201ENSMUST00000187278 698 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm21617-201ENSMUST00000188297 691 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm37164-201ENSMUST00000192809 637 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm43853-201ENSMUST00000197162 301 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm12458-201ENSMUST00000119387 495 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm43304-201ENSMUST00000196803 326 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Gm9309-201ENSMUST00000223537 546 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Shank3Q4ACU6 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Gm23577-201ENSMUST00000103950 110 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Gm35702-201ENSMUST00000198653 511 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Shank3Q4ACU6 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.59□□□□□ -1.51
Shank3Q4ACU6 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
Shank3Q4ACU6 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Shank3Q4ACU6 Gm9003-201ENSMUST00000121810 482 ntBASIC5.58□□□□□ -1.52
Shank3Q4ACU6 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms