Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm23279-201ENSMUST00000157912 97 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm25048-201ENSMUST00000158598 91 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm16102-201ENSMUST00000160955 420 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Cfap61-214ENSMUST00000167179 183 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm22166-201ENSMUST00000178419 121 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm23288-201ENSMUST00000179213 121 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm27004-201ENSMUST00000183300 727 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm27599-201ENSMUST00000183758 174 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm29086-201ENSMUST00000186774 222 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm29085-201ENSMUST00000187108 225 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm28080-201ENSMUST00000188552 722 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm37375-201ENSMUST00000193859 387 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm37385-201ENSMUST00000195223 387 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm43798-201ENSMUST00000202056 394 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm7039-201ENSMUST00000205138 346 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm45409-201ENSMUST00000211486 252 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm45405-201ENSMUST00000211544 609 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC117202.2-201ENSMUST00000226491 1101 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm24200-201ENSMUST00000082955 157 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm22284-201ENSMUST00000104132 132 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm25346-201ENSMUST00000104509 128 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Mir669i-201ENSMUST00000117007 127 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm11859-201ENSMUST00000118099 455 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm13156-201ENSMUST00000118348 321 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm13349-201ENSMUST00000118436 411 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm14901-201ENSMUST00000119001 283 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm7494-201ENSMUST00000121248 441 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm11472-201ENSMUST00000121305 556 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm11761-201ENSMUST00000121392 445 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm16362-201ENSMUST00000135189 214 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm25434-201ENSMUST00000158278 167 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm22160-201ENSMUST00000158405 328 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Scarna10-201ENSMUST00000158992 325 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm21171-201ENSMUST00000180048 673 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm28885-201ENSMUST00000185615 563 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm18700-201ENSMUST00000185791 553 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm36998-201ENSMUST00000193205 704 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Trbv24-201ENSMUST00000194614 347 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Mir142-201ENSMUST00000198092 64 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm44465-201ENSMUST00000199536 114 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm7181-201ENSMUST00000202197 434 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 BC049739-201ENSMUST00000202626 660 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.29□□□□□ -1.56
Pcdh1F7BJK1 Gm45082-201ENSMUST00000206082 601 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms