Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm22370-201ENSMUST00000102422 83 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm21991-201ENSMUST00000180006 508 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm6546-201ENSMUST00000192096 766 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm43084-201ENSMUST00000200696 947 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm44879-201ENSMUST00000207007 503 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm3816-201ENSMUST00000209803 433 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lsm1Q8VC85 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.48□□□□□ -1.69
Lsm1Q8VC85 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Mir1188-201ENSMUST00000116756 120 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm12760-201ENSMUST00000117861 482 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm3267-201ENSMUST00000118671 473 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm5391-201ENSMUST00000121155 613 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm14784-201ENSMUST00000121604 663 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm16345-201ENSMUST00000146065 158 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm23537-201ENSMUST00000157536 330 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm23046-201ENSMUST00000158369 284 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm28614-201ENSMUST00000186483 458 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm21742-201ENSMUST00000189352 548 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm36994-201ENSMUST00000192941 492 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm37881-201ENSMUST00000193001 421 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm16415-201ENSMUST00000080097 489 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm10916-201ENSMUST00000080330 483 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm26072-201ENSMUST00000083135 107 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Zfp850-201ENSMUST00000099111 941 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Neat1-201ENSMUST00000173672 20771 ntBASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Lsm1Q8VC85 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Lsm1Q8VC85 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
Lsm1Q8VC85 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lsm1Q8VC85 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lsm1Q8VC85 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm8145-201ENSMUST00000118220 745 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm25103-201ENSMUST00000122671 318 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm24628-201ENSMUST00000122761 289 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm23250-201ENSMUST00000157444 267 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm22819-201ENSMUST00000157445 303 ntBASIC4.46□□□□□ -1.7
Lsm1Q8VC85 Gm23496-201ENSMUST00000157741 248 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms