Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44548-201ENSMUST00000208929 192 ntBASIC5.19□□□□□ -1.58
NcanP55066 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.19□□□□□ -1.58
NcanP55066 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.19□□□□□ -1.58
NcanP55066 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NcanP55066 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.19□□□□□ -1.58
NcanP55066 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.19□□□□□ -1.58
NcanP55066 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.19□□□□□ -1.58
NcanP55066 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NcanP55066 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NcanP55066 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NcanP55066 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NcanP55066 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NcanP55066 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NcanP55066 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.19□□□□□ -1.58
NcanP55066 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.19□□□□□ -1.58
NcanP55066 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NcanP55066 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.19□□□□□ -1.58
NcanP55066 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
NcanP55066 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NcanP55066 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.19□□□□□ -1.58
NcanP55066 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.19□□□□□ -1.58
NcanP55066 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.18□□□□□ -1.58
NcanP55066 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NcanP55066 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm24987-201ENSMUST00000104453 134 ntBASIC5.18□□□□□ -1.58
NcanP55066 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm13867-201ENSMUST00000120844 395 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gm24507-201ENSMUST00000157683 134 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm4540-201ENSMUST00000170669 429 ntBASIC5.18□□□□□ -1.58
NcanP55066 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm27033-201ENSMUST00000183226 544 ntBASIC5.18□□□□□ -1.58
NcanP55066 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm27883-201ENSMUST00000183941 102 ntBASIC5.18□□□□□ -1.58
NcanP55066 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.18□□□□□ -1.58
NcanP55066 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.18□□□□□ -1.58
NcanP55066 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gm30280-201ENSMUST00000192214 262 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm37684-201ENSMUST00000192779 355 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm4248-201ENSMUST00000196905 316 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm44038-201ENSMUST00000203952 889 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.18□□□□□ -1.58
NcanP55066 Gm44583-201ENSMUST00000207478 281 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gm45628-201ENSMUST00000210849 274 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Gm7807-201ENSMUST00000212475 578 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Gm3086-202ENSMUST00000221248 310 ntBASIC5.18□□□□□ -1.58
NcanP55066 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.18□□□□□ -1.58
NcanP55066 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NcanP55066 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.18□□□□□ -1.58
NcanP55066 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NcanP55066 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NcanP55066 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.18□□□□□ -1.58
NcanP55066 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.18□□□□□ -1.58
NcanP55066 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NcanP55066 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NcanP55066 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.18□□□□□ -1.58
NcanP55066 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NcanP55066 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.17□□□□□ -1.58
NcanP55066 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Gm14086-201ENSMUST00000117152 173 ntBASIC5.17□□□□□ -1.58
NcanP55066 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.17□□□□□ -1.58
NcanP55066 Gm23441-201ENSMUST00000157268 127 ntBASIC5.17□□□□□ -1.58
NcanP55066 Gm24314-201ENSMUST00000158274 123 ntBASIC5.17□□□□□ -1.58
NcanP55066 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.17□□□□□ -1.58
NcanP55066 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NcanP55066 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NcanP55066 Gm45344-201ENSMUST00000211610 341 ntBASIC5.17□□□□□ -1.58
NcanP55066 Gm45857-201ENSMUST00000212207 356 ntBASIC5.17□□□□□ -1.58
NcanP55066 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms