Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Mir3110-201ENSMUST00000175053 80 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcflA2APF3 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm37111-201ENSMUST00000193250 634 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm9173-201ENSMUST00000198054 400 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcflA2APF3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm18306-201ENSMUST00000207338 569 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm45359-201ENSMUST00000210635 427 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.29□□□□□ -1.72
CtcflA2APF3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm24525-201ENSMUST00000082917 151 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm23459-201ENSMUST00000083259 131 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcflA2APF3 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CtcflA2APF3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcflA2APF3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.29□□□□□ -1.72
CtcflA2APF3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm12073-201ENSMUST00000117382 524 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm7206-201ENSMUST00000117730 508 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm6373-201ENSMUST00000121026 360 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm12752-201ENSMUST00000121657 811 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm12893-201ENSMUST00000121732 275 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm25176-201ENSMUST00000122640 125 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm23229-201ENSMUST00000157297 105 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm23082-201ENSMUST00000157852 133 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm3307-201ENSMUST00000176164 632 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.28□□□□□ -1.72
CtcflA2APF3 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.28□□□□□ -1.72
CtcflA2APF3 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm18904-201ENSMUST00000218756 329 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Mir215-201ENSMUST00000083628 112 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CtcflA2APF3 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.28□□□□□ -1.72
CtcflA2APF3 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CtcflA2APF3 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CtcflA2APF3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CtcflA2APF3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.27□□□□□ -1.73
CtcflA2APF3 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.27□□□□□ -1.73
CtcflA2APF3 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm23993-201ENSMUST00000157478 144 ntBASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm23496-201ENSMUST00000157741 248 ntBASIC4.27□□□□□ -1.73
CtcflA2APF3 Gm22968-201ENSMUST00000157955 118 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms