Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm12039-201ENSMUST00000118219 180 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm12677-201ENSMUST00000118668 426 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm12222-201ENSMUST00000121368 260 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm11197-201ENSMUST00000145158 839 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm23318-201ENSMUST00000158000 108 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Mir3080-201ENSMUST00000175010 79 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Rab26os-201ENSMUST00000176215 477 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm4322-201ENSMUST00000191094 336 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm37884-201ENSMUST00000191857 818 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm4587-201ENSMUST00000209135 637 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm33601-201ENSMUST00000210001 961 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Gm2099-201ENSMUST00000220979 412 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim9Q8C7M3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
Trim9Q8C7M3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim9Q8C7M3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trim9Q8C7M3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Trim9Q8C7M3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm9429-201ENSMUST00000117804 868 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm16463-201ENSMUST00000120527 721 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm23429-201ENSMUST00000122486 149 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm24371-201ENSMUST00000122662 267 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm23250-201ENSMUST00000157444 267 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm24860-201ENSMUST00000158457 276 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm10319-202ENSMUST00000159439 846 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm37433-201ENSMUST00000192695 678 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm37441-201ENSMUST00000194430 678 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm37659-201ENSMUST00000194574 111 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm43968-201ENSMUST00000203388 389 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm45458-201ENSMUST00000209900 522 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm45912-201ENSMUST00000210646 543 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm9973-202ENSMUST00000220926 166 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm6863-201ENSMUST00000052882 636 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim9Q8C7M3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms