Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC7.93□□□□□ -1.14
Trim35Q8C006 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm43300-201ENSMUST00000198540 2043 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm14631-201ENSMUST00000119067 594 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm12820-201ENSMUST00000119233 342 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm11600-201ENSMUST00000119592 240 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm13153-201ENSMUST00000120969 637 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm11263-201ENSMUST00000121853 749 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm12778-201ENSMUST00000122341 333 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm26184-201ENSMUST00000157686 131 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm28094-201ENSMUST00000185262 390 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm18970-201ENSMUST00000186040 938 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm28122-201ENSMUST00000187088 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm29652-201ENSMUST00000188622 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm28819-206ENSMUST00000188816 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm29079-201ENSMUST00000188875 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm29382-201ENSMUST00000189549 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm29212-201ENSMUST00000190384 615 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm37185-201ENSMUST00000193852 410 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm38080-201ENSMUST00000194035 268 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm8767-201ENSMUST00000215786 1070 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 AC122533.2-201ENSMUST00000223772 545 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 CT009515.2-201ENSMUST00000226126 736 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm37789-201ENSMUST00000192862 2889 ntBASIC7.92□□□□□ -1.14
Trim35Q8C006 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim35Q8C006 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Trim35Q8C006 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim35Q8C006 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Mir466p-201ENSMUST00000103925 89 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm14645-201ENSMUST00000118597 417 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm16016-201ENSMUST00000120831 550 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm26026-201ENSMUST00000122726 123 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm22328-201ENSMUST00000158074 112 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm23474-201ENSMUST00000158884 75 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm3370-201ENSMUST00000171785 500 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm27636-201ENSMUST00000184528 122 ntBASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim35Q8C006 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms