Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm24043-201ENSMUST00000083108 116 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm24041-201ENSMUST00000083115 156 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Thap6-201ENSMUST00000191860 3151 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm23948-201ENSMUST00000104030 132 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Mir669g-201ENSMUST00000116809 123 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm14970-201ENSMUST00000122289 355 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm15187-201ENSMUST00000122329 264 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm15899-201ENSMUST00000128586 238 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm23028-201ENSMUST00000158773 265 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm22355-201ENSMUST00000175531 96 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Mir8118-201ENSMUST00000183962 129 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm27957-201ENSMUST00000184054 127 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm28976-201ENSMUST00000188070 144 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm37828-201ENSMUST00000192496 432 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm8748-201ENSMUST00000211125 587 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm34005-201ENSMUST00000215834 282 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm5023-201ENSMUST00000217442 587 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm18113-201ENSMUST00000220630 303 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm23452-201ENSMUST00000083327 107 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm25410-201ENSMUST00000083758 137 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm17165-201ENSMUST00000096155 493 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.12□□□□□ -1.59
Col8a1Q00780 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col8a1Q00780 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col8a1Q00780 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm24430-201ENSMUST00000104077 104 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm26146-201ENSMUST00000104478 185 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm15480-201ENSMUST00000120442 519 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm15120-201ENSMUST00000120602 301 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm5383-201ENSMUST00000121177 617 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm12396-201ENSMUST00000121600 306 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm25057-201ENSMUST00000157366 88 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Cfap61-214ENSMUST00000167179 183 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm24418-201ENSMUST00000177597 79 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm24639-201ENSMUST00000178518 79 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm23076-201ENSMUST00000179082 79 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm25077-201ENSMUST00000179157 79 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms