Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Sox3P53784 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.58□□□□□ -1.68
Sox3P53784 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.58□□□□□ -1.68
Sox3P53784 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm23746-201ENSMUST00000104229 125 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm11196-201ENSMUST00000119052 395 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm13214-201ENSMUST00000122137 408 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm22958-201ENSMUST00000122512 184 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.58□□□□□ -1.68
Sox3P53784 Gm15534-201ENSMUST00000137642 562 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Gm26490-201ENSMUST00000157879 140 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm16566-201ENSMUST00000160387 910 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm17091-201ENSMUST00000163248 357 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm27818-201ENSMUST00000184536 159 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm27414-201ENSMUST00000185033 381 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm28468-201ENSMUST00000188536 615 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm37884-201ENSMUST00000191857 818 ntBASIC4.58□□□□□ -1.68
Sox3P53784 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.58□□□□□ -1.68
Sox3P53784 Gm44237-201ENSMUST00000205183 936 ntBASIC4.58□□□□□ -1.68
Sox3P53784 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm7822-201ENSMUST00000222433 581 ntBASIC4.58□□□□□ -1.68
Sox3P53784 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.58□□□□□ -1.68
Sox3P53784 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox3P53784 Mir338-201ENSMUST00000083666 98 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox3P53784 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Synpr-207ENSMUST00000223583 3362 ntBASIC4.58□□□□□ -1.68
Sox3P53784 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.58□□□□□ -1.68
Sox3P53784 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Sox3P53784 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Sox3P53784 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sox3P53784 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm12007-201ENSMUST00000120978 597 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm14122-201ENSMUST00000122076 973 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm22211-201ENSMUST00000158097 156 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm6632-201ENSMUST00000168425 954 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm27528-201ENSMUST00000183544 205 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox3P53784 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm10048-201ENSMUST00000194196 372 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm5842-201ENSMUST00000195073 622 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm43604-201ENSMUST00000199799 705 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm44261-201ENSMUST00000203337 209 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm19131-201ENSMUST00000203408 789 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm20946-201ENSMUST00000212367 461 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm7588-201ENSMUST00000216866 571 ntBASIC4.57□□□□□ -1.68
Sox3P53784 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sox3P53784 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Sox3P53784 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.57□□□□□ -1.68
Sox3P53784 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox3P53784 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sox3P53784 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sox3P53784 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Sox3P53784 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sox3P53784 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms