Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 AC122024.1-201ENSMUST00000219276 4850 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm12125-201ENSMUST00000117261 736 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm10241-201ENSMUST00000117664 286 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm13690-201ENSMUST00000118989 285 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm44032-201ENSMUST00000204841 166 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm8288-201ENSMUST00000223406 593 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Gm23377-201ENSMUST00000082943 126 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col6a3E9PWQ3 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm25490-201ENSMUST00000158734 130 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 AF357428-201ENSMUST00000083815 69 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm28803-201ENSMUST00000190385 764 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Gm44966-201ENSMUST00000208096 157 ntBASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a3E9PWQ3 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm8747-201ENSMUST00000195392 751 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm6057-201ENSMUST00000195927 314 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm23443-201ENSMUST00000082916 128 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm22840-201ENSMUST00000158444 136 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col6a3E9PWQ3 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms