Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm14711-201ENSMUST00000117056 217 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm8692-201ENSMUST00000118102 438 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13455-201ENSMUST00000118767 517 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm4234-201ENSMUST00000119747 714 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm25487-201ENSMUST00000158725 125 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16557-201ENSMUST00000159182 191 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17121-201ENSMUST00000170414 847 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17222-201ENSMUST00000180135 847 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm27796-201ENSMUST00000183863 261 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm19147-201ENSMUST00000199622 652 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29778-201ENSMUST00000201667 466 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 BC049739-201ENSMUST00000202626 660 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm19441-201ENSMUST00000221545 330 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 AC120540.1-201ENSMUST00000221879 324 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12582-201ENSMUST00000030555 697 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.12□□□□□ -1.43
Sh3rf1Q69ZI1 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22371-201ENSMUST00000104588 130 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12878-201ENSMUST00000118744 332 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm6884-201ENSMUST00000119318 615 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12638-201ENSMUST00000119531 298 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm15781-201ENSMUST00000120216 323 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm25374-201ENSMUST00000158158 101 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm24733-201ENSMUST00000158863 253 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17366-201ENSMUST00000167629 187 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17054-201ENSMUST00000169811 259 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm25246-201ENSMUST00000175476 69 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm23977-201ENSMUST00000177871 74 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.11□□□□□ -1.43
Sh3rf1Q69ZI1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms