Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm28840-205ENSMUST00000189320 615 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm28788-201ENSMUST00000189717 375 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm28835-203ENSMUST00000190062 615 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm29558-201ENSMUST00000190134 375 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm37946-201ENSMUST00000192064 347 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm6520-201ENSMUST00000200636 410 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm5338-201ENSMUST00000209530 639 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm11360-201ENSMUST00000221898 262 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm5321-201ENSMUST00000072050 447 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm22807-201ENSMUST00000082737 129 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm23452-201ENSMUST00000083327 107 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm24254-201ENSMUST00000083702 104 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox9Q04887 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm24935-201ENSMUST00000103770 110 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm16394-201ENSMUST00000117289 675 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm11781-201ENSMUST00000118328 472 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm13555-201ENSMUST00000121668 319 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm6081-201ENSMUST00000134472 489 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Mir6899-201ENSMUST00000184798 64 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm28997-201ENSMUST00000188759 429 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm28956-201ENSMUST00000189047 427 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm19224-201ENSMUST00000190477 793 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm38291-201ENSMUST00000193671 259 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm18553-201ENSMUST00000194152 634 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm43524-201ENSMUST00000197278 298 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm45189-201ENSMUST00000208567 363 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm18026-201ENSMUST00000222789 727 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 AC124729.1-202ENSMUST00000225587 938 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.87□□□□□ -1.47
Sox9Q04887 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox9Q04887 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox9Q04887 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox9Q04887 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms