Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 Mir375-201ENSMUST00000083682 64 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 Gm23345-201ENSMUST00000083817 150 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 Gm25512-201ENSMUST00000083863 107 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pde6bP23440 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Pde6bP23440 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.57□□□□□ -1.36
Pde6bP23440 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pde6bP23440 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.57□□□□□ -1.36
Pde6bP23440 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.56□□□□□ -1.36
Pde6bP23440 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm24273-201ENSMUST00000102332 164 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Lipe-203ENSMUST00000105177 1251 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm14670-201ENSMUST00000117327 337 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm15073-201ENSMUST00000117432 634 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm11252-201ENSMUST00000120572 939 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm22235-201ENSMUST00000157085 110 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm15914-201ENSMUST00000161922 309 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm29111-201ENSMUST00000188823 696 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm28584-201ENSMUST00000191489 696 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm38138-201ENSMUST00000193274 696 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm43368-201ENSMUST00000200638 409 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm17988-201ENSMUST00000208796 535 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.56□□□□□ -1.36
Pde6bP23440 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.56□□□□□ -1.36
Pde6bP23440 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pde6bP23440 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Pde6bP23440 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.56□□□□□ -1.36
Pde6bP23440 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pde6bP23440 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pde6bP23440 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pde6bP23440 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pde6bP23440 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pde6bP23440 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Pde6bP23440 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pde6bP23440 Gm25415-201ENSMUST00000104220 132 ntBASIC6.55□□□□□ -1.36
Pde6bP23440 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms