Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm14307-201ENSMUST00000118930 291 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm15400-201ENSMUST00000118944 601 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm6744-201ENSMUST00000119303 543 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm22452-201ENSMUST00000122804 104 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm14297-201ENSMUST00000129110 291 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm16259-201ENSMUST00000145241 553 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm12504-202ENSMUST00000148026 306 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm25904-201ENSMUST00000158491 143 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm24734-201ENSMUST00000158860 262 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm20480-201ENSMUST00000173953 250 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm25944-201ENSMUST00000178758 94 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm43370-201ENSMUST00000196437 284 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm43779-201ENSMUST00000196691 829 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm8724-201ENSMUST00000081668 483 ntBASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.34□□□□□ -1.55
Pcdh1F7BJK1 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Pcdh1F7BJK1 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm14050-201ENSMUST00000117052 346 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm11445-201ENSMUST00000119101 532 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm7421-201ENSMUST00000119298 639 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm12308-201ENSMUST00000120440 389 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm14531-201ENSMUST00000120845 285 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm7365-201ENSMUST00000120877 639 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm26162-201ENSMUST00000157793 132 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm17919-201ENSMUST00000173344 312 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm27266-201ENSMUST00000184521 123 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm8392-201ENSMUST00000185647 835 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms