Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 AC121137.1-201ENSMUST00000225272 602 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 AC158142.3-201ENSMUST00000226230 675 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col17a1Q07563 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col17a1Q07563 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col17a1Q07563 Gm4725-201ENSMUST00000151048 587 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Gm22698-201ENSMUST00000175375 108 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Gm2147-201ENSMUST00000193588 639 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Gm7587-201ENSMUST00000207618 1021 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Gm18255-201ENSMUST00000211316 765 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col17a1Q07563 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Col17a1Q07563 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col17a1Q07563 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col17a1Q07563 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.65□□□□□ -1.18
Col17a1Q07563 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col17a1Q07563 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col17a1Q07563 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col17a1Q07563 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col17a1Q07563 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col17a1Q07563 Gm45235-201ENSMUST00000208016 4465 ntBASIC7.65□□□□□ -1.19
Col17a1Q07563 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col17a1Q07563 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col17a1Q07563 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Mir546-201ENSMUST00000102105 121 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm14943-201ENSMUST00000118056 546 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm25965-201ENSMUST00000157170 93 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm25999-201ENSMUST00000175398 133 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm25197-201ENSMUST00000175516 126 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col17a1Q07563 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm31123-201ENSMUST00000192094 666 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm18529-201ENSMUST00000193025 1257 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm4734-201ENSMUST00000200117 777 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm42579-201ENSMUST00000200512 734 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm2691-201ENSMUST00000203205 901 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm45845-201ENSMUST00000207326 582 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm18645-202ENSMUST00000212222 760 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col17a1Q07563 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Gm37764-201ENSMUST00000194664 2150 ntBASIC7.64□□□□□ -1.19
Col17a1Q07563 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col17a1Q07563 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
Col17a1Q07563 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm43871-201ENSMUST00000204931 1955 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm26146-201ENSMUST00000104478 185 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm2288-201ENSMUST00000118560 638 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm15988-201ENSMUST00000118677 367 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm2318-201ENSMUST00000119623 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7438-201ENSMUST00000177664 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7408-201ENSMUST00000178014 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7386-201ENSMUST00000178020 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm3657-201ENSMUST00000178170 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7415-201ENSMUST00000178205 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7398-201ENSMUST00000178589 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm7391-201ENSMUST00000178680 639 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms