Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Trbv28-201ENSMUST00000192804 264 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm46233-201ENSMUST00000217831 449 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm11212-201ENSMUST00000118337 618 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm45722-201ENSMUST00000213075 466 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 AC122305.2-201ENSMUST00000215148 834 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm20045-201ENSMUST00000192658 5577 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a3E9PWQ3 Gm24931-201ENSMUST00000158324 107 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm43855-201ENSMUST00000197462 507 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm15313-201ENSMUST00000119179 282 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm11471-201ENSMUST00000121824 198 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Mir8097-201ENSMUST00000185150 119 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm19232-201ENSMUST00000211621 652 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm46190-201ENSMUST00000219650 427 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm12582-201ENSMUST00000030555 697 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm7219-201ENSMUST00000119619 297 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm22908-201ENSMUST00000177620 110 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Gm45252-201ENSMUST00000211579 397 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Snord7-201ENSMUST00000083781 97 ntBASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a3E9PWQ3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms