Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upk3aQ9JKX8 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Snord65-201ENSMUST00000104269 72 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm23594-201ENSMUST00000104307 134 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm22899-201ENSMUST00000104540 131 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm6461-201ENSMUST00000120015 633 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm24751-201ENSMUST00000157844 102 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm20239-201ENSMUST00000196610 982 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm25134-201ENSMUST00000082646 160 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm24919-201ENSMUST00000083020 106 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upk3aQ9JKX8 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm8129-201ENSMUST00000118230 213 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm12186-201ENSMUST00000119050 945 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm11366-201ENSMUST00000119279 429 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm25669-201ENSMUST00000157699 112 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm23964-201ENSMUST00000157966 107 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm26354-201ENSMUST00000158221 129 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm17711-201ENSMUST00000172028 237 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm5558-201ENSMUST00000178933 495 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm44603-201ENSMUST00000206820 367 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm6065-201ENSMUST00000081336 492 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm6043-201ENSMUST00000099961 492 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms