Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm9442-201ENSMUST00000194242 319 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm35570-201ENSMUST00000198730 681 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm44061-201ENSMUST00000203962 1195 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm18855-201ENSMUST00000206689 570 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm45209-201ENSMUST00000207122 353 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm7822-201ENSMUST00000222433 581 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC147639.1-201ENSMUST00000224216 661 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 CT025538.2-201ENSMUST00000226083 772 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC130673.2-201ENSMUST00000228091 797 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Olfr881-201ENSMUST00000074611 948 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Mir20a-201ENSMUST00000083508 107 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm45263-201ENSMUST00000210377 1375 ntBASIC5.8□□□□□ -1.48
Syne4Q8CII8 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Syne4Q8CII8 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 AC154552.6-201ENSMUST00000221365 1342 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm11584-201ENSMUST00000120636 325 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm3835-201ENSMUST00000120752 403 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm22817-201ENSMUST00000157448 356 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm23046-201ENSMUST00000158369 284 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm23387-201ENSMUST00000158586 107 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm2966-201ENSMUST00000166052 481 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm17204-201ENSMUST00000167936 478 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm24417-201ENSMUST00000178123 79 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm24653-201ENSMUST00000178541 79 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm25934-201ENSMUST00000178642 79 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm27033-201ENSMUST00000183226 544 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm27266-201ENSMUST00000184521 123 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm37670-201ENSMUST00000193622 229 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm18382-201ENSMUST00000194394 582 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm43136-201ENSMUST00000200403 636 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm45551-201ENSMUST00000211459 928 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm8106-201ENSMUST00000213123 523 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm6841-201ENSMUST00000220602 598 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.79□□□□□ -1.48
Syne4Q8CII8 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne4Q8CII8 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms