Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.69□□□□□ -1.5
Nup88Q8CEC0 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm13491-201ENSMUST00000118267 235 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm11910-201ENSMUST00000121624 432 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm28660-201ENSMUST00000186496 253 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm2497-201ENSMUST00000189539 601 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm43309-201ENSMUST00000200837 458 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm18100-201ENSMUST00000200897 452 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm7822-201ENSMUST00000222433 581 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm23058-201ENSMUST00000093703 107 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nup88Q8CEC0 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm12073-201ENSMUST00000117382 524 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm14885-201ENSMUST00000117969 496 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm11822-201ENSMUST00000119177 415 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm17081-201ENSMUST00000167363 478 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Mir6943-201ENSMUST00000185186 66 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm18426-201ENSMUST00000191874 973 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm37005-201ENSMUST00000193281 1164 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup88Q8CEC0 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm25419-201ENSMUST00000104215 191 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm8202-201ENSMUST00000117682 310 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm12638-201ENSMUST00000119531 298 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms