Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm12393-201ENSMUST00000117084 848 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm12683-201ENSMUST00000117528 415 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm14930-201ENSMUST00000118864 652 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm13367-201ENSMUST00000119955 796 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm13815-201ENSMUST00000119963 412 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm11896-201ENSMUST00000121105 820 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm23429-201ENSMUST00000122486 149 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm13194-201ENSMUST00000142299 311 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm25861-201ENSMUST00000158251 109 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm25898-201ENSMUST00000158303 106 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm26172-201ENSMUST00000158421 134 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm25348-201ENSMUST00000158961 111 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm16236-201ENSMUST00000159588 379 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm10074-201ENSMUST00000174543 249 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm5473-201ENSMUST00000179326 642 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm26991-201ENSMUST00000180950 620 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm44403-201ENSMUST00000198554 129 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm42428-201ENSMUST00000198677 302 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm19181-201ENSMUST00000218891 940 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 AC147628.1-201ENSMUST00000228193 688 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm14797-201ENSMUST00000119378 1480 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sp140Q6NSQ5 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm14939-201ENSMUST00000120347 680 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm27659-201ENSMUST00000183472 98 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm8719-201ENSMUST00000203602 534 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm44952-201ENSMUST00000204443 433 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm8039-201ENSMUST00000204758 712 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm45458-201ENSMUST00000209900 522 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm18587-201ENSMUST00000213736 841 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm22456-201ENSMUST00000082578 125 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm24707-201ENSMUST00000082812 107 ntBASIC5.38□□□□□ -1.55
Sp140Q6NSQ5 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms