Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim28Q62318 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim28Q62318 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Trim28Q62318 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Mir193b-201ENSMUST00000103784 79 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm15480-201ENSMUST00000120442 519 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm15168-201ENSMUST00000121057 316 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm22312-201ENSMUST00000158005 130 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm28385-201ENSMUST00000185671 292 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm29184-201ENSMUST00000190038 334 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm8891-201ENSMUST00000198546 832 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm32308-201ENSMUST00000203053 280 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm3148-201ENSMUST00000203594 612 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm44952-201ENSMUST00000204443 433 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim28Q62318 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim28Q62318 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm25135-201ENSMUST00000082648 143 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim28Q62318 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.51□□□□□ -1.37
Trim28Q62318 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim28Q62318 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim28Q62318 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Trim28Q62318 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm9435-201ENSMUST00000120379 877 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm16588-201ENSMUST00000162889 355 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm27266-201ENSMUST00000184521 123 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim28Q62318 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim28Q62318 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm18268-201ENSMUST00000208445 943 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm19987-201ENSMUST00000216339 499 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm5374-202ENSMUST00000222910 314 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm10704-201ENSMUST00000098952 730 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms