Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm18128-201ENSMUST00000172625 511 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Mir3104-201ENSMUST00000174911 63 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm22646-201ENSMUST00000175130 115 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21850-201ENSMUST00000179792 359 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm27541-201ENSMUST00000184078 122 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm29124-201ENSMUST00000186576 452 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm28967-201ENSMUST00000187351 281 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm37421-201ENSMUST00000193088 132 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm7142-201ENSMUST00000194232 586 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm17771-201ENSMUST00000194477 1147 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm43368-201ENSMUST00000200638 409 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm3257-201ENSMUST00000207217 675 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Sox9Q04887 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm5185-201ENSMUST00000080271 619 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sox9Q04887 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox9Q04887 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Sox9Q04887 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm26376-201ENSMUST00000104784 110 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm15670-201ENSMUST00000117740 447 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm11845-201ENSMUST00000117886 327 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm14755-201ENSMUST00000118037 384 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm11825-201ENSMUST00000120710 736 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm12732-201ENSMUST00000121688 180 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm3339-201ENSMUST00000163462 475 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.9□□□□□ -1.46
Sox9Q04887 Mir7012-201ENSMUST00000183900 64 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm29281-201ENSMUST00000188077 381 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm36985-201ENSMUST00000195595 379 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm4714-201ENSMUST00000203395 279 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm44984-201ENSMUST00000207802 394 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox9Q04887 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 AC161426.1-201ENSMUST00000214137 286 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm18160-201ENSMUST00000214279 827 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm18487-201ENSMUST00000215826 878 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm2544-201ENSMUST00000222702 756 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm18247-201ENSMUST00000222937 601 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm24319-201ENSMUST00000083389 107 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Gm23795-201ENSMUST00000084006 137 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox9Q04887 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox9Q04887 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms