Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col4a1P02463 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col4a1P02463 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Gm6214-201ENSMUST00000178845 541 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Gm6802-202ENSMUST00000186566 126 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Gm19774-201ENSMUST00000190667 114 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Gm37272-201ENSMUST00000193401 488 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Gm5876-201ENSMUST00000203735 243 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a1P02463 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
Col4a1P02463 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC5.51□□□□□ -1.53
Col4a1P02463 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col4a1P02463 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col4a1P02463 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.51□□□□□ -1.53
Col4a1P02463 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col4a1P02463 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col4a1P02463 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col4a1P02463 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a1P02463 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm15426-201ENSMUST00000117823 556 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Gm23816-201ENSMUST00000179617 132 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Gm44032-201ENSMUST00000204841 166 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm44002-201ENSMUST00000205134 594 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Col4a1P02463 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col4a1P02463 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Mir879-201ENSMUST00000104703 76 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Gm5757-201ENSMUST00000117494 528 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm9245-201ENSMUST00000200528 983 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Gm18011-201ENSMUST00000203717 565 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col4a1P02463 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Col4a1P02463 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.5□□□□□ -1.53
Col4a1P02463 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col4a1P02463 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col4a1P02463 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm13787-201ENSMUST00000120422 168 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Gm13214-201ENSMUST00000122137 408 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.49□□□□□ -1.53
Col4a1P02463 Gm44779-201ENSMUST00000206937 708 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.49□□□□□ -1.53
Col4a1P02463 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col4a1P02463 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col4a1P02463 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.49□□□□□ -1.53
Col4a1P02463 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Col4a1P02463 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.48□□□□□ -1.53
Col4a1P02463 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col4a1P02463 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col4a1P02463 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.48□□□□□ -1.53
Col4a1P02463 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms