Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm15466-201ENSMUST00000122299 333 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm37636-201ENSMUST00000193583 359 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 AC173482.3-201ENSMUST00000225492 1212 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Snora70-201ENSMUST00000083047 137 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm13557-201ENSMUST00000120771 382 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm12026-201ENSMUST00000120961 1024 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm13132-201ENSMUST00000121194 472 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Mir8116-201ENSMUST00000184134 97 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm44214-201ENSMUST00000204153 606 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 AC129219.1-201ENSMUST00000224336 448 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm25140-201ENSMUST00000083254 140 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm8666-201ENSMUST00000117517 292 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm44256-201ENSMUST00000203304 335 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm18329-201ENSMUST00000215832 589 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm29774-201ENSMUST00000219270 436 ntBASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a3E9PWQ3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm26148-201ENSMUST00000157430 68 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm29704-201ENSMUST00000196011 253 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm23686-201ENSMUST00000083241 164 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms